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Creating hierarchical models of protein families based on Expressed Sequence Tags: the "Sprockets" analysis pipeline.
We have created an analysis pipeline called Sprockets, which can be used ...
Gordon PM, Weinel C, Jacobi C, Kampf U, Kriventseva E, Sensen CW,
http://dx.doi.org/10.1016/j.aca.2006.01.072
Anal Chim Acta. 2006 Mar 30;564(1):123-32. Epub 2006 Feb 28.
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Proteomics in cancer research: methods and application of array-based protein profiling technologies.
With the human genome sequence now determined, the field of molecular ...
Hoeben A, Landuyt B, Botrus G, De Boeck G, Guetens G, Highly M, van Oosterom AT, de Bruijn EA,
http://dx.doi.org/10.1016/j.aca.2005.07.059
Anal Chim Acta. 2006 Mar 30;564(1):19-33. Epub 2005 Aug 30.
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Investigation of differentially expressed proteins due to the inhibitory effects of berberine in human liver cancer cell line HepG2.
The investigation of differentially expressed proteins was used together ...
Tan YL, Goh D, Ong ES,
http://dx.doi.org/10.1039/b517116d
Mol Biosyst. 2006 May;2(5):250-8. Epub 2006 Mar 30.
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Chemogenomics: drug discovery's panacea?
Chemogenomics aims towards the systematic identification of small ...
Jacoby E,
http://dx.doi.org/10.1039/b603004c
Mol Biosyst. 2006 May;2(5):218-20. Epub 2006 Mar 30.
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The system is broken.
When a scientist doing work in genomics, or cell biology, or biochemistry, ...
Petsko GA,
http://dx.doi.org/10.1186/gb-2006-7-3-105
Genome Biol. 2006;7(3):105. Epub 2006 Mar 30.
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Proteome analysis of cold stress response in Arabidopsis thaliana using DIGE-technology.
A proteome study based on 2-D gel electrophoresis was performed in order ...
Amme S, Matros A, Schlesier B, Mock HP,
http://dx.doi.org/10.1093/jxb/erj129
J Exp Bot. 2006;57(7):1537-46. Epub 2006 Mar 30.
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The heat shock response of Synechocystis sp. PCC 6803 analysed by transcriptomics and proteomics.
When cells of the cyanobacterium Synechocystis sp. PCC 6803 are exposed to ...
Suzuki I, Simon WJ, Slabas AR,
http://dx.doi.org/10.1093/jxb/erj148
J Exp Bot. 2006;57(7):1573-8. Epub 2006 Mar 30.
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Relative and absolute quantitative shotgun proteomics: targeting low-abundance proteins in Arabidopsis thaliana.
The plant system is a highly dynamic structure on all molecular levels, ...
Wienkoop S, Weckwerth W,
http://dx.doi.org/10.1093/jxb/erj157
J Exp Bot. 2006;57(7):1529-35. Epub 2006 Mar 30.
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Sequencing covalent modifications of membrane proteins.
A number of strategies have successfully extended plant proteomics into ...
Whitelegge JP, Laganowsky A, Nishio J, Souda P, Zhang H, Cramer WA,
http://dx.doi.org/10.1093/jxb/erj163
J Exp Bot. 2006;57(7):1515-22. Epub 2006 Mar 30.
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A perspective on the use of iTRAQ reagent technology for protein complex and profiling studies.
Proteomic research includes the characterization of protein mixtures in ...
Zieske LR,
http://dx.doi.org/10.1093/jxb/erj168
J Exp Bot. 2006;57(7):1501-8. Epub 2006 Mar 30.
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