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Combining comparative genomics with de novo motif discovery to identify human transcription factor DNA-binding motifs.
BACKGROUND: As more and more genomes are sequenced, comparative genomics ...
Mao L, Zheng WJ,
http://dx.doi.org/10.1186/1471-2105-7-S4-S21
BMC Bioinformatics. 2006 Dec 12;7 Suppl 4:S21.
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GenomeBlast: a web tool for small genome comparison.
BACKGROUND: Comparative genomics has become an essential approach for ...
Lu G, Jiang L, Helikar RM, Rowley TW, Zhang L, Chen X, Moriyama EN,
http://dx.doi.org/10.1186/1471-2105-7-S4-S18
BMC Bioinformatics. 2006 Dec 12;7 Suppl 4:S18.
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Development of computations in bioscience and bioinformatics and its application: review of the Symposium of Computations in Bioinformatics and Bioscience (SCBB06).
The first symposium of computations in bioinformatics and bioscience ...
Deng Y, Ni J, Zhang C,
http://dx.doi.org/10.1186/1471-2105-7-S4-S1
BMC Bioinformatics. 2006 Dec 12;7 Suppl 4:S1.
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Molecular tools for metalloprotease sub-proteome generation.
Molecular systems biology, the highly challenging post-genomic research ...
Collet M, Lenger J, Jenssen K, Plattner HP, Sewald N,
http://dx.doi.org/10.1016/j.jbiotec.2006.12.005
J Biotechnol. 2007 Apr 30;129(2):316-28. Epub 2006 Dec 12.
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Identification of proteins whose expression is up- or down-regulated in the mushroom bodies in the honeybee brain using proteomics.
To identify protein(s) with different expression patterns in the mushroom ...
Uno Y, Fujiyuki T, Morioka M, Takeuchi H, Kubo T,
http://dx.doi.org/10.1016/j.febslet.2006.12.004
FEBS Lett. 2007 Jan 9;581(1):97-101. Epub 2006 Dec 12.
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Nomenclature and structural biology of allergens.
Purified allergens are named using the systematic nomenclature of the ...
Chapman MD, Pomes A, Breiteneder H, Ferreira F,
http://dx.doi.org/10.1016/j.jaci.2006.11.001
J Allergy Clin Immunol. 2007 Feb;119(2):414-20. Epub 2006 Dec 12.
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Sample preparation for serum/plasma profiling and biomarker identification by mass spectrometry.
In this article, we present an overview of the different strategies for ...
Luque-Garcia JL, Neubert TA,
http://dx.doi.org/10.1016/j.chroma.2006.11.054
J Chromatogr A. 2007 Jun 15;1153(1-2):259-76. Epub 2006 Dec 12.
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Integrated proteomics and genomics strategies bring new insight into Candida albicans response upon macrophage interaction.
The interaction of Candida albicans with macrophages is considered a ...
Fernandez-Arenas E, Cabezon V, Bermejo C, Arroyo J, Nombela C, Diez-Orejas R, Gil C,
http://dx.doi.org/10.1074/mcp.M600210-MCP200
Mol Cell Proteomics. 2007 Mar;6(3):460-78. Epub 2006 Dec 12.
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On the proper use of mass accuracy in proteomics.
Mass measurement is the main outcome of mass spectrometry-based proteomics ...
Zubarev R, Mann M,
http://dx.doi.org/10.1074/mcp.M600380-MCP200
Mol Cell Proteomics. 2007 Mar;6(3):377-81. Epub 2006 Dec 12.
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EBP, a program for protein identification using multiple tandem mass spectrometry datasets.
MS/MS combined with database search methods can identify the proteins ...
Price TS, Lucitt MB, Wu W, Austin DJ, Pizarro A, Yocum AK, Blair IA, FitzGerald GA, Grosser T,
http://dx.doi.org/10.1074/mcp.T600049-MCP200
Mol Cell Proteomics. 2007 Mar;6(3):527-36. Epub 2006 Dec 12.
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