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Genomics Publications Published : 2007 - 02 - 23
A P system and a constructive membrane-inspired DNA algorithm for solving the Maximum Clique Problem.
We present a P system with replicated rewriting to solve the Maximum ...
Garcia-Arnau M, Manrique D, Rodriguez-Paton A, Sosik P,
http://dx.doi.org/10.1016/j.biosystems.2007.02.005
Biosystems. 2007 Nov-Dec;90(3):687-97. Epub 2007 Feb 23.

Accurate ranking of differentially expressed genes by a distribution-free shrinkage approach.
High-dimensional case-control analysis is encountered in many different ...
Opgen-Rhein R, Strimmer K,
http://dx.doi.org/10.2202/1544-6115.1252
Stat Appl Genet Mol Biol. 2007;6:Article9. Epub 2007 Feb 23.

Differential binding of calmodulin-related proteins to their targets revealed through high-density Arabidopsis protein microarrays.
Calmodulins (CaMs) are the most ubiquitous calcium sensors in eukaryotes. ...
Popescu SC, Popescu GV, Bachan S, Zhang Z, Seay M, Gerstein M, Snyder M, Dinesh-Kumar SP,
http://dx.doi.org/10.1073/pnas.0611615104
Proc Natl Acad Sci U S A. 2007 Mar 13;104(11):4730-5. Epub 2007 Feb 23.

Heart failure and genomics. Judge DP, Johnson NM, Cirino AL, Ho CY,
http://dx.doi.org/10.1016/j.jacc.2006.12.020
J Am Coll Cardiol. 2007 Mar 13;49(10):1106; author reply 1106-7. Epub 2007

The structure of Plasmodium vivax phosphatidylethanolamine-binding protein suggests a functional motif containing a left-handed helix.
The structure of a putative Raf kinase inhibitor protein (RKIP) homolog ...
Arakaki T, Neely H, Boni E, Mueller N, Buckner FS, Van Voorhis WC, Lauricella A, DeTitta G, Luft J, Hol WG, Merritt EA,
http://dx.doi.org/10.1107/S1744309107007580
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 Mar 1;63(Pt

Improved method for differential expression proteomics using trypsin-catalyzed 18O labeling with a correction for labeling efficiency.
Quantitative strategies relying on stable isotope labeling and isotope ...
Ramos-Fernandez A, Lopez-Ferrer D, Vazquez J,
http://dx.doi.org/10.1074/mcp.T600029-MCP200
Mol Cell Proteomics. 2007 Jul;6(7):1274-86. Epub 2007 Feb 23.

Phosphopeptide enrichment by aliphatic hydroxy acid-modified metal oxide chromatography for nano-LC-MS/MS in proteomics applications.
We developed novel methods for phosphopeptide enrichment using aliphatic ...
Sugiyama N, Masuda T, Shinoda K, Nakamura A, Tomita M, Ishihama Y,
http://dx.doi.org/10.1074/mcp.T600060-MCP200
Mol Cell Proteomics. 2007 Jun;6(6):1103-9. Epub 2007 Feb 23.

Approaching a complete repository of sequence-verified protein-encoding clones for Saccharomyces cerevisiae.
The availability of an annotated genome sequence for the yeast ...
Hu Y, Rolfs A, Bhullar B, Murthy TV, Zhu C, Berger MF, Camargo AA, Kelley F, McCarron S, Jepson D, Richardson A, Raphael J, Moreira D, Taycher E, Zuo D, Mohr S, Kane MF, Williamson J, Simpson A, Bulyk ML, Harlow E, Marsischky G, Kolodner RD, LaBaer J,
http://dx.doi.org/10.1101/gr.6037607
Genome Res. 2007 Apr;17(4):536-43. Epub 2007 Feb 23.

HIV-1 infected monocyte-derived macrophages affect the human brain microvascular endothelial cell proteome: new insights into blood-brain barrier dysfunction for HIV-1-associated dementia.
Blood-brain barrier (BBB) compromise and transendothelial migration of ...
Ricardo-Dukelow M, Kadiu I, Rozek W, Schlautman J, Persidsky Y, Ciborowski P, Kanmogne GD, Gendelman HE,
http://dx.doi.org/10.1016/j.jneuroim.2007.01.004
J Neuroimmunol. 2007 Apr;185(1-2):37-46. Epub 2007 Feb 23.

Genetic complexity and quantitative trait loci mapping of yeast morphological traits.
Functional genomics relies on two essential parameters: the sensitivity of ...
Nogami S, Ohya Y, Yvert G,
http://dx.doi.org/10.1371/journal.pgen.0030031
PLoS Genet. 2007 Feb 23;3(2):e31.

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