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Predicting protein disorder by analyzing amino acid sequence.
BACKGROUND: Many protein regions and some entire proteins have no definite ...
Yang JY, Yang MQ,
http://dx.doi.org/10.1186/1471-2164-9-S2-S8
BMC Genomics. 2008 Sep 16;9 Suppl 2:S8.
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Assessment of data processing to improve reliability of microarray experiments using genomic DNA reference.
BACKGROUND: Using genomic DNA as common reference in microarray ...
Yang Y, Zhu M, Wu L, Zhou J,
http://dx.doi.org/10.1186/1471-2164-9-S2-S5
BMC Genomics. 2008 Sep 16;9 Suppl 2:S5.
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The FEATURE framework for protein function annotation: modeling new functions, improving performance, and extending to novel applications.
Structural genomics efforts contribute new protein structures that often ...
Halperin I, Glazer DS, Wu S, Altman RB,
http://dx.doi.org/10.1186/1471-2164-9-S2-S2
BMC Genomics. 2008 Sep 16;9 Suppl 2:S2.
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Improving the specificity of exon prediction using comparative genomics.
BACKGROUND: Computational gene prediction tools routinely generate large ...
Wu J,
http://dx.doi.org/10.1186/1471-2164-9-S2-S13
BMC Genomics. 2008 Sep 16;9 Suppl 2:S13.
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Approaches to reduce false positives and false negatives in the analysis of microarray data: applications in type 1 diabetes research.
BACKGROUND: As studies of molecular biology system attempt to achieve a ...
Wu J, Lenchik NI, Gerling IC,
http://dx.doi.org/10.1186/1471-2164-9-S2-S12
BMC Genomics. 2008 Sep 16;9 Suppl 2:S12.
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Genomics, molecular imaging, bioinformatics, and bio-nano-info integration are synergistic components of translational medicine and personalized healthcare research.
Supported by National Science Foundation (NSF), International Society of ...
Yang JY, Yang MQ, Arabnia HR, Deng Y,
http://dx.doi.org/10.1186/1471-2164-9-S2-I1
BMC Genomics. 2008 Sep 16;9 Suppl 2:I1.
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Informed consent in the genomics era. Mascalzoni D, Hicks A, Pramstaller P, Wjst M,
http://dx.doi.org/10.1371/journal.pmed.0050192
PLoS Med. 2008 Sep 16;5(9):e192.
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The whole alignment and nothing but the alignment: the problem of spurious alignment flanks.
Pairwise sequence alignment is a ubiquitous tool for inferring the ...
Frith MC, Park Y, Sheetlin SL, Spouge JL,
http://dx.doi.org/10.1093/nar/gkn579
Nucleic Acids Res. 2008 Oct;36(18):5863-71. Epub 2008 Sep 16.
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GOSLING: a rule-based protein annotator using BLAST and GO.
GOSLING is a web-based protein function annotator that uses a decision ...
Jones CE, Schwerdt J, Bretag TA, Baumann U, Brown AL,
http://dx.doi.org/10.1093/bioinformatics/btn486
Bioinformatics. 2008 Nov 15;24(22):2628-9. Epub 2008 Sep 16.
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Specific alignment of structured RNA: stochastic grammars and sequence annealing.
MOTIVATION: Whole-genome screens suggest that eukaryotic genomes are dense ...
Bradley RK, Pachter L, Holmes I,
http://dx.doi.org/10.1093/bioinformatics/btn495
Bioinformatics. 2008 Dec 1;24(23):2677-83. Epub 2008 Sep 16.
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