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Multiple Sequence Alignment

Recent Publications on multiple sequence alignment :

HandAlign: Bayesian multiple sequence alignment, phylogeny, and ancestral reconstruction.
SUMMARY: We describe handalign, a software package for Bayesian...
Department of Bioengineering, University of California Berkeley, CA, USA. Bioinformatics. 2012 Jan 28.
DOI Direct Link
Sequence Coevolution between RNA and Protein Characterized by Mutual Information between Residue Triplets.
Coevolving residues in a multiple sequence alignment provide evolutionary...
Chemical and Systems Biology, Stanford University, Stanford, California, PLoS One. 2012;7(1):e30022. Epub 2012 Jan 18.
DOI Direct Link
An improved scoring method for protein residue conservation and multiple sequence alignment.
One of the most fundamental operation in biological sequence analysis is...
IEEE Trans Nanobioscience. 2011 Dec;10(4):275-85.
DOI Direct Link
Design of multiple sequence alignment algorithms on parallel, distributed memory supercomputers.
The challenge of comparing two or more genomes that have undergone...
Conf Proc IEEE Eng Med Biol Soc. 2011 Aug;2011:924-7.
DOI Direct Link
Identification and characterization of a serine protease inhibitor (PtSerpin) in the swimming crab Portunus trituberculatus.
Serine protease inhibitors (Serpins) play a key role in diverse immune...
EMBL, Institute of Oceanology, Chinese Academy of Sciences, 7 Nanhai Road, Fish Shellfish Immunol. 2012 Jan 10.
DOI Direct Link

Patents:

US Patent No.Title
8076114 Cytochrome P450 oxygenases
8084591 Factor VII or VIIA-like molecules
8088393 Swine influenza hemagglutinin variants
8088396 Isolated complexes of endotoxin and modified MD-2
8088572 Polynucleotides for the detection of Escherichia coli O157:H7 and Escherichia coli O157:NM verotoxin producers