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Multiple Sequence Alignment

Recent Publications on multiple sequence alignment :

Probabilistic phylogenetic inference with insertions and deletions.
A fundamental task in sequence analysis is to calculate the probability of...
Janelia Farm Research Campus, Howard Hughes Medical Institute, Ashburn, PLoS Comput Biol. 2008 Sep 12;4(9):e1000172.
DOI Direct Link
Learning scoring schemes for sequence alignment from partial examples.
When aligning biological sequences, the choice of parameter values for the...
Department of Computer Science, The University of Arizona, Tucson, AZ IEEE/ACM Trans Comput Biol Bioinform. 2008 Oct-Dec;5(4):546-56.
DOI Direct Link
The ConSurf-DB: pre-calculated evolutionary conservation profiles of protein structures.
ConSurf-DB is a repository for evolutionary conservation analysis of the...
Department of Biochemistry, George S. Wise Faculty of Life Sciences, Tel Nucleic Acids Res. 2008 Oct 29.
DOI Direct Link
Knowledge-based expert systems and a proof-of-concept case study for multiple sequence alignment construction and analysis.
The traditional approach to bioinformatics analyses relies on independent...
Brief Bioinform. 2008 Oct 29.
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Evolution of nonstop, no-go and nonsense-mediated mRNA decay and their termination factor-derived components.
ABSTRACT: BACKGROUND: Members of the eukaryote/archaea specific eRF1 and...
BMC Evol Biol. 2008 Oct 23;8(1):290.
DOI Direct Link

Patents:

US Patent No.Title
7427696 Transcription factor stress-related proteins and methods of use in plants
7432416 Generation of plants with improved drought tolerance
7432417 Generation of plants with improved pathogen resistance
7435540 PrP.sup.Sc-selective peptides
7435542 Exhaustive selection of RNA aptamers against complex targets